Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs12791925 | chr11:8551585 | G/C | 0.000403 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
KIRP | rs12805419 | chr11:1014835 | G/T | 2.91E-8 | 214 | 14.87 | 19.3 | 10.6 | KM Plot |
KIRP | rs1284405 | chr18:13662349 | A/T | 0 | 214 | 3.8 | 16.73 | 16.43 | KM Plot |
KIRP | rs12918801 | chr16:20441787 | G/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12919284 | chr16:20442154 | G/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12920137 | chr16:20442153 | T/C | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12921615 | chr16:20439070 | A/G | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
KIRP | rs12924989 | chr16:20442926 | T/C | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12925133 | chr16:20443012 | T/C | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12926086 | chr16:19858822 | T/C | 5.81E-5 | 213 | 15.08 | 16.93 | 15.58 | KM Plot |
KIRP | rs12926547 | chr16:20439951 | A/G | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
KIRP | rs12926771 | chr16:20439834 | G/A | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
KIRP | rs12927344 | chr16:20440175 | G/A | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
KIRP | rs12927779 | chr16:20440655 | C/G | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12931611 | chr16:20440953 | A/G | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |